STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04105.1OmpA domain protein. (480 aa)    
Predicted Functional Partners:
AKJ02947.1
Outer membrane protein A precursor.
  
     0.772
AKJ04614.1
Outer membrane protein A precursor.
  
     0.771
AKJ06767.1
Flagellar motor rotation protein MotB.
  
 
 0.652
AKJ02588.1
Hypothetical protein.
  
     0.648
AKJ00475.1
Flagellar motor rotation protein MotB.
  
 
 0.627
AKJ04104.1
Hemagglutinin protein.
       0.558
AKJ04103.1
Hypothetical protein.
       0.554
AKJ02580.1
Lipoprotein releasing system transmembrane protein LolC.
  
 
   0.540
tolB
tolB protein precursor protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.526
AKJ05847.1
tolB protein precursor protein.
 
 
 0.496
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
Server load: low (10%) [HD]