STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04137.1ABC-type transport system involved in resistance to organic solvents, periplasmic component. (333 aa)    
Predicted Functional Partners:
AKJ04134.1
Putative ABC transporter, permease component YrbE.
 
 0.990
AKJ04136.1
Methionine ABC transporter ATP-binding protein.
 
 0.982
AKI99307.1
Putative ABC transporter permease protein.
 
 0.953
AKJ03703.1
ABC amino acid transporter, inner membrane subunit.
 
 0.952
AKJ03706.1
Mammalian cell entry related domain protein.
  
  
 0.951
AKJ04124.1
ABC transporter permease protein.
 
 0.950
AKI99308.1
Methionine ABC transporter ATP-binding protein.
 
 0.938
AKJ03704.1
Methionine ABC transporter ATP-binding protein.
 
 0.936
AKI99309.1
VpsC protein.
  
  
0.931
AKJ07584.1
ABC-type transport system involved in resistance to organic solvents, auxiliary component.
 
 0.930
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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