Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98468.1 | AKI99496.1 | AA314_00095 | AA314_01123 | Nitrogenase. | PAS/PAC domain protein. | 0.465 |
AKI98468.1 | AKI99786.1 | AA314_00095 | AA314_01413 | Nitrogenase. | Chemotaxis protein methyltransferase CheR. | 0.414 |
AKI98468.1 | AKJ00270.1 | AA314_00095 | AA314_01896 | Nitrogenase. | Hypothetical protein. | 0.405 |
AKI98468.1 | AKJ00529.1 | AA314_00095 | AA314_02155 | Nitrogenase. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.774 |
AKI98468.1 | AKJ02951.1 | AA314_00095 | AA314_04577 | Nitrogenase. | PAS/PAC domain protein. | 0.453 |
AKI98468.1 | AKJ04142.1 | AA314_00095 | AA314_05768 | Nitrogenase. | Response regulator of zinc sigma-54-dependent two-component system. | 0.912 |
AKI99496.1 | AKI98468.1 | AA314_01123 | AA314_00095 | PAS/PAC domain protein. | Nitrogenase. | 0.465 |
AKI99496.1 | AKI99786.1 | AA314_01123 | AA314_01413 | PAS/PAC domain protein. | Chemotaxis protein methyltransferase CheR. | 0.953 |
AKI99496.1 | AKJ00270.1 | AA314_01123 | AA314_01896 | PAS/PAC domain protein. | Hypothetical protein. | 0.991 |
AKI99496.1 | AKJ00529.1 | AA314_01123 | AA314_02155 | PAS/PAC domain protein. | RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.442 |
AKI99496.1 | AKJ02951.1 | AA314_01123 | AA314_04577 | PAS/PAC domain protein. | PAS/PAC domain protein. | 0.986 |
AKI99496.1 | AKJ04142.1 | AA314_01123 | AA314_05768 | PAS/PAC domain protein. | Response regulator of zinc sigma-54-dependent two-component system. | 0.465 |
AKI99786.1 | AKI98468.1 | AA314_01413 | AA314_00095 | Chemotaxis protein methyltransferase CheR. | Nitrogenase. | 0.414 |
AKI99786.1 | AKI99496.1 | AA314_01413 | AA314_01123 | Chemotaxis protein methyltransferase CheR. | PAS/PAC domain protein. | 0.953 |
AKI99786.1 | AKJ00270.1 | AA314_01413 | AA314_01896 | Chemotaxis protein methyltransferase CheR. | Hypothetical protein. | 0.795 |
AKI99786.1 | AKJ02951.1 | AA314_01413 | AA314_04577 | Chemotaxis protein methyltransferase CheR. | PAS/PAC domain protein. | 0.935 |
AKI99786.1 | AKJ04142.1 | AA314_01413 | AA314_05768 | Chemotaxis protein methyltransferase CheR. | Response regulator of zinc sigma-54-dependent two-component system. | 0.414 |
AKJ00270.1 | AKI98468.1 | AA314_01896 | AA314_00095 | Hypothetical protein. | Nitrogenase. | 0.405 |
AKJ00270.1 | AKI99496.1 | AA314_01896 | AA314_01123 | Hypothetical protein. | PAS/PAC domain protein. | 0.991 |
AKJ00270.1 | AKI99786.1 | AA314_01896 | AA314_01413 | Hypothetical protein. | Chemotaxis protein methyltransferase CheR. | 0.795 |
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