STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04175.1Hypothetical protein. (195 aa)    
Predicted Functional Partners:
AKJ07983.1
Hypothetical protein.
  
     0.693
AKJ08015.1
Putative GTPase.
  
     0.652
trmB
tRNA (guanine46-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
 
  
 0.634
AKJ04176.1
Dihydrofolate reductase.
       0.603
AKJ02193.1
Putative membrane protein.
  
     0.586
AKJ04174.1
Oxidoreductase.
       0.548
AKJ06862.1
Transcriptional regulator, TetR family.
  
     0.522
AKJ06738.1
Hypothetical protein.
  
     0.500
AKJ03518.1
Uracil-DNA glycosylase, family 5.
 
     0.425
AKJ00951.1
Ser/Thr and Tyr protein phosphatase.
  
     0.421
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.