Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI99353.1 | AKJ00464.1 | AA314_00980 | AA314_02090 | Hypothetical protein. | Tat. | 0.476 |
AKI99353.1 | AKJ04179.1 | AA314_00980 | AA314_05805 | Hypothetical protein. | Metal dependent amidohydrolase. | 0.661 |
AKI99353.1 | AKJ06461.1 | AA314_00980 | AA314_08087 | Hypothetical protein. | Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | 0.766 |
AKI99353.1 | AKJ07926.1 | AA314_00980 | AA314_09552 | Hypothetical protein. | Transport ATP-binding protein CydC. | 0.521 |
AKI99353.1 | AKJ07927.1 | AA314_00980 | AA314_09553 | Hypothetical protein. | ABC transporter, ATP-binding protein. | 0.498 |
AKJ00464.1 | AKI99353.1 | AA314_02090 | AA314_00980 | Tat. | Hypothetical protein. | 0.476 |
AKJ00464.1 | AKJ04179.1 | AA314_02090 | AA314_05805 | Tat. | Metal dependent amidohydrolase. | 0.704 |
AKJ00464.1 | AKJ04256.1 | AA314_02090 | AA314_05882 | Tat. | Hypothetical protein. | 0.466 |
AKJ00464.1 | AKJ06461.1 | AA314_02090 | AA314_08087 | Tat. | Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | 0.673 |
AKJ02042.1 | AKJ04179.1 | AA314_03668 | AA314_05805 | RTX toxin. | Metal dependent amidohydrolase. | 0.659 |
AKJ02042.1 | AKJ06067.1 | AA314_03668 | AA314_07693 | RTX toxin. | Kazal-type serine protease inhibitor domain protein. | 0.687 |
AKJ02042.1 | AKJ06239.1 | AA314_03668 | AA314_07865 | RTX toxin. | Trehalose synthase. | 0.765 |
AKJ02042.1 | AKJ07926.1 | AA314_03668 | AA314_09552 | RTX toxin. | Transport ATP-binding protein CydC. | 0.617 |
AKJ02042.1 | AKJ07927.1 | AA314_03668 | AA314_09553 | RTX toxin. | ABC transporter, ATP-binding protein. | 0.560 |
AKJ04179.1 | AKI99353.1 | AA314_05805 | AA314_00980 | Metal dependent amidohydrolase. | Hypothetical protein. | 0.661 |
AKJ04179.1 | AKJ00464.1 | AA314_05805 | AA314_02090 | Metal dependent amidohydrolase. | Tat. | 0.704 |
AKJ04179.1 | AKJ02042.1 | AA314_05805 | AA314_03668 | Metal dependent amidohydrolase. | RTX toxin. | 0.659 |
AKJ04179.1 | AKJ04256.1 | AA314_05805 | AA314_05882 | Metal dependent amidohydrolase. | Hypothetical protein. | 0.636 |
AKJ04179.1 | AKJ06067.1 | AA314_05805 | AA314_07693 | Metal dependent amidohydrolase. | Kazal-type serine protease inhibitor domain protein. | 0.620 |
AKJ04179.1 | AKJ06239.1 | AA314_05805 | AA314_07865 | Metal dependent amidohydrolase. | Trehalose synthase. | 0.621 |
page 1 of 4