Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ02448.1 | AKJ04197.1 | AA314_04074 | AA314_05823 | Hypothetical protein. | Hypothetical protein. | 0.487 |
AKJ02448.1 | AKJ05171.1 | AA314_04074 | AA314_06797 | Hypothetical protein. | Efflux transporter, RND family, MFP subunit. | 0.872 |
AKJ02868.1 | AKJ04197.1 | AA314_04494 | AA314_05823 | HrpA-like helicase. | Hypothetical protein. | 0.521 |
AKJ02868.1 | AKJ05171.1 | AA314_04494 | AA314_06797 | HrpA-like helicase. | Efflux transporter, RND family, MFP subunit. | 0.564 |
AKJ03282.1 | AKJ04197.1 | AA314_04908 | AA314_05823 | Permease. | Hypothetical protein. | 0.543 |
AKJ03282.1 | AKJ05171.1 | AA314_04908 | AA314_06797 | Permease. | Efflux transporter, RND family, MFP subunit. | 0.872 |
AKJ04197.1 | AKJ02448.1 | AA314_05823 | AA314_04074 | Hypothetical protein. | Hypothetical protein. | 0.487 |
AKJ04197.1 | AKJ02868.1 | AA314_05823 | AA314_04494 | Hypothetical protein. | HrpA-like helicase. | 0.521 |
AKJ04197.1 | AKJ03282.1 | AA314_05823 | AA314_04908 | Hypothetical protein. | Permease. | 0.543 |
AKJ04197.1 | AKJ04198.1 | AA314_05823 | AA314_05824 | Hypothetical protein. | Hypothetical protein. | 0.742 |
AKJ04197.1 | AKJ04199.1 | AA314_05823 | AA314_05825 | Hypothetical protein. | Hypothetical protein. | 0.737 |
AKJ04197.1 | AKJ04200.1 | AA314_05823 | AA314_05826 | Hypothetical protein. | Acyl-CoA dehydrogenase, short-chain specific. | 0.657 |
AKJ04197.1 | AKJ04755.1 | AA314_05823 | AA314_06381 | Hypothetical protein. | Permease. | 0.502 |
AKJ04197.1 | AKJ05169.1 | AA314_05823 | AA314_06795 | Hypothetical protein. | Permease. | 0.539 |
AKJ04197.1 | AKJ05171.1 | AA314_05823 | AA314_06797 | Hypothetical protein. | Efflux transporter, RND family, MFP subunit. | 0.613 |
AKJ04197.1 | AKJ07005.1 | AA314_05823 | AA314_08631 | Hypothetical protein. | Hypothetical protein. | 0.595 |
AKJ04198.1 | AKJ04197.1 | AA314_05824 | AA314_05823 | Hypothetical protein. | Hypothetical protein. | 0.742 |
AKJ04198.1 | AKJ04199.1 | AA314_05824 | AA314_05825 | Hypothetical protein. | Hypothetical protein. | 0.898 |
AKJ04198.1 | AKJ04200.1 | AA314_05824 | AA314_05826 | Hypothetical protein. | Acyl-CoA dehydrogenase, short-chain specific. | 0.696 |
AKJ04199.1 | AKJ04197.1 | AA314_05825 | AA314_05823 | Hypothetical protein. | Hypothetical protein. | 0.737 |
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