STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04211.1Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (274 aa)    
Predicted Functional Partners:
AKJ04212.1
Putative acyl-coa dehydrogenase fade36.
 
    0.923
AKJ04210.1
Isovaleryl-CoA dehydrogenase.
 
    0.873
AKJ04209.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.736
AKJ04202.1
Phosphoglycerate mutase family protein.
 
     0.683
AKI98858.1
TesB-like acyl-CoA thioesterase 1.
  
     0.585
AKJ04959.1
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
    0.581
AKJ01646.1
Acyl dehydratase.
  
   
 0.562
AKJ04201.1
Putative aminoglycoside phosphotransferase.
 
    0.543
AKI98654.1
Hypothetical protein.
  
     0.435
AKJ02424.1
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.427
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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