STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04235.1FHA domain protein. (323 aa)    
Predicted Functional Partners:
AKJ04236.1
Serine protease precursor MucD/AlgY associated with sigma factor RpoE.
 
     0.945
AKJ05749.1
F5/8 type C domain protein.
  
    0.725
AKJ05929.1
F5/8 type C domain protein.
  
    0.712
AKJ04237.1
Hypothetical protein.
       0.658
AKJ00343.1
Internalin, putative.
  
     0.655
AKJ02914.1
Hypothetical protein.
  
     0.635
AKJ01243.1
Hypothetical protein.
  
     0.633
AKJ07382.1
Exonuclease SbcC.
 
     0.622
AKJ00756.1
DnaJ-class molecular chaperone CbpA.
  
     0.592
AKJ06429.1
Type III secretion bridge between inner and outermembrane lipoprotein.
 
  
 0.584
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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