Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98585.1 | AKJ01038.1 | AA314_00212 | AA314_02664 | Proline dehydrogenase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | 0.510 |
AKI98585.1 | AKJ03771.1 | AA314_00212 | AA314_05397 | Proline dehydrogenase. | Ornithine cyclodeaminase. | 0.920 |
AKI98585.1 | AKJ04069.1 | AA314_00212 | AA314_05695 | Proline dehydrogenase. | WD-repeat protein. | 0.900 |
AKI98585.1 | AKJ04291.1 | AA314_00212 | AA314_05917 | Proline dehydrogenase. | Carbapenem antibiotics biosynthesis protein carD. | 0.900 |
AKI98585.1 | AKJ04675.1 | AA314_00212 | AA314_06301 | Proline dehydrogenase. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.900 |
AKI98585.1 | AKJ05273.1 | AA314_00212 | AA314_06899 | Proline dehydrogenase. | Sodium iodide symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.706 |
AKI98585.1 | AKJ06789.1 | AA314_00212 | AA314_08415 | Proline dehydrogenase. | Two-component sensor CbrA: intrcellular carbon:nitrogen balance. | 0.725 |
AKI98585.1 | AKJ06901.1 | AA314_00212 | AA314_08527 | Proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.978 |
AKI98585.1 | AKJ07430.1 | AA314_00212 | AA314_09056 | Proline dehydrogenase. | Proline iminopeptidase. | 0.900 |
AKI98585.1 | proC | AA314_00212 | AA314_06523 | Proline dehydrogenase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.928 |
AKJ01038.1 | AKI98585.1 | AA314_02664 | AA314_00212 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Proline dehydrogenase. | 0.510 |
AKJ01038.1 | AKJ04291.1 | AA314_02664 | AA314_05917 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Carbapenem antibiotics biosynthesis protein carD. | 0.572 |
AKJ01038.1 | AKJ05273.1 | AA314_02664 | AA314_06899 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Sodium iodide symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.526 |
AKJ01038.1 | AKJ06789.1 | AA314_02664 | AA314_08415 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Two-component sensor CbrA: intrcellular carbon:nitrogen balance. | 0.583 |
AKJ01038.1 | AKJ06901.1 | AA314_02664 | AA314_08527 | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.476 |
AKJ03771.1 | AKI98585.1 | AA314_05397 | AA314_00212 | Ornithine cyclodeaminase. | Proline dehydrogenase. | 0.920 |
AKJ03771.1 | AKJ04069.1 | AA314_05397 | AA314_05695 | Ornithine cyclodeaminase. | WD-repeat protein. | 0.900 |
AKJ03771.1 | AKJ04291.1 | AA314_05397 | AA314_05917 | Ornithine cyclodeaminase. | Carbapenem antibiotics biosynthesis protein carD. | 0.920 |
AKJ03771.1 | AKJ04675.1 | AA314_05397 | AA314_06301 | Ornithine cyclodeaminase. | Proline iminopeptidase; Belongs to the peptidase S33 family. | 0.900 |
AKJ03771.1 | AKJ07430.1 | AA314_05397 | AA314_09056 | Ornithine cyclodeaminase. | Proline iminopeptidase. | 0.900 |
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