STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04335.1Soluble lytic murein transglycosylase precursor. (797 aa)    
Predicted Functional Partners:
AKJ05823.1
Flagellar motor switch protein FliM.
 
  
 0.811
AKJ05826.1
Flagellum-specific ATP synthase FliI.
  
 
 0.665
AKJ05847.1
tolB protein precursor protein.
 
  
 0.658
AKJ04336.1
Flagellar sensor histidine kinase FleS.
 
     0.630
AKJ01931.1
TPR domain protein, putative component of TonB system.
 
     0.606
AKJ04333.1
HNH endonuclease family protein.
  
  
 0.598
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
       0.576
AKJ04299.1
TPR domain protein, putative component of TonB system.
  
     0.569
AKJ08337.1
OmpA domain protein.
 
  
 0.568
AKJ04971.1
Hypothetical protein.
 
    0.559
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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