STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04399.1Hypothetical protein. (381 aa)    
Predicted Functional Partners:
AKJ04398.1
tRNA (adenine37-N(6))-methyltransferase TrmN6; Belongs to the methyltransferase superfamily.
       0.801
AKJ07382.1
Exonuclease SbcC.
  
     0.720
AKJ01243.1
Hypothetical protein.
  
     0.658
AKJ06884.1
TPR domain protein.
  
     0.656
AKJ02846.1
Flagellar motor protein.
  
     0.653
AKJ04970.1
Putative lipoprotein.
  
     0.651
AKJ00731.1
FrgA.
  
     0.645
AKJ01733.1
Phage recombination protein Bet.
  
     0.640
AKJ02914.1
Hypothetical protein.
  
     0.634
AKJ06930.1
Hypothetical protein.
  
     0.630
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.