Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ03649.1 | AKJ04411.1 | AA314_05275 | AA314_06037 | Protein-L-isoD(D-D) O-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Radical SAM domain protein. | 0.443 |
AKJ04411.1 | AKJ03649.1 | AA314_06037 | AA314_05275 | Radical SAM domain protein. | Protein-L-isoD(D-D) O-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.443 |
AKJ04411.1 | AKJ04412.1 | AA314_06037 | AA314_06038 | Radical SAM domain protein. | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | 0.528 |
AKJ04411.1 | AKJ05020.1 | AA314_06037 | AA314_06646 | Radical SAM domain protein. | Hypothetical protein. | 0.417 |
AKJ04411.1 | AKJ05057.1 | AA314_06037 | AA314_06683 | Radical SAM domain protein. | Kef-type K+ transport systems. | 0.522 |
AKJ04411.1 | AKJ06650.1 | AA314_06037 | AA314_08276 | Radical SAM domain protein. | Type IV pilus biogenesis protein PilP. | 0.423 |
AKJ04411.1 | pcm | AA314_06037 | AA314_04820 | Radical SAM domain protein. | Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.542 |
AKJ04412.1 | AKJ04411.1 | AA314_06038 | AA314_06037 | Alanine dehydrogenase; Belongs to the AlaDH/PNT family. | Radical SAM domain protein. | 0.528 |
AKJ05020.1 | AKJ04411.1 | AA314_06646 | AA314_06037 | Hypothetical protein. | Radical SAM domain protein. | 0.417 |
AKJ05020.1 | AKJ05057.1 | AA314_06646 | AA314_06683 | Hypothetical protein. | Kef-type K+ transport systems. | 0.665 |
AKJ05020.1 | AKJ06650.1 | AA314_06646 | AA314_08276 | Hypothetical protein. | Type IV pilus biogenesis protein PilP. | 0.681 |
AKJ05057.1 | AKJ04411.1 | AA314_06683 | AA314_06037 | Kef-type K+ transport systems. | Radical SAM domain protein. | 0.522 |
AKJ05057.1 | AKJ05020.1 | AA314_06683 | AA314_06646 | Kef-type K+ transport systems. | Hypothetical protein. | 0.665 |
AKJ05057.1 | AKJ06650.1 | AA314_06683 | AA314_08276 | Kef-type K+ transport systems. | Type IV pilus biogenesis protein PilP. | 0.595 |
AKJ06650.1 | AKJ04411.1 | AA314_08276 | AA314_06037 | Type IV pilus biogenesis protein PilP. | Radical SAM domain protein. | 0.423 |
AKJ06650.1 | AKJ05020.1 | AA314_08276 | AA314_06646 | Type IV pilus biogenesis protein PilP. | Hypothetical protein. | 0.681 |
AKJ06650.1 | AKJ05057.1 | AA314_08276 | AA314_06683 | Type IV pilus biogenesis protein PilP. | Kef-type K+ transport systems. | 0.595 |
pcm | AKJ04411.1 | AA314_04820 | AA314_06037 | Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Radical SAM domain protein. | 0.542 |