STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04426.1Hypothetical protein. (533 aa)    
Predicted Functional Partners:
AKJ04427.1
Hypothetical protein.
      0.976
AKJ04425.1
Hypothetical protein.
       0.635
AKJ04424.1
Hypothetical protein.
       0.608
AKJ04423.1
Homoserine dehydrogenase.
       0.560
AKJ04428.1
Hypothetical protein.
       0.532
AKJ05578.1
Type I restriction-modification system, restriction subunit R.
  
  
 0.523
AKI98617.1
Formate dehydrogenase O beta subunit.
   
    0.469
AKI98766.1
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
    0.469
AKJ01772.1
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
    0.469
AKJ05642.1
Fe-S-cluster-containing hydrogenase components 1.
   
    0.469
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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