Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKI98949.1 | AKJ04441.1 | AA314_00576 | AA314_06067 | Methanol oxidation genes, glmU-like protein. | Putative transmembrane protein. | 0.405 |
AKI98949.1 | AKJ04442.1 | AA314_00576 | AA314_06068 | Methanol oxidation genes, glmU-like protein. | Hypothetical protein. | 0.408 |
AKJ04375.1 | AKJ04441.1 | AA314_06001 | AA314_06067 | Hypothetical protein; Belongs to the sulfur carrier protein TusA family. | Putative transmembrane protein. | 0.560 |
AKJ04375.1 | AKJ04442.1 | AA314_06001 | AA314_06068 | Hypothetical protein; Belongs to the sulfur carrier protein TusA family. | Hypothetical protein. | 0.560 |
AKJ04440.1 | AKJ04441.1 | AA314_06066 | AA314_06067 | RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. | Putative transmembrane protein. | 0.499 |
AKJ04440.1 | AKJ04442.1 | AA314_06066 | AA314_06068 | RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.499 |
AKJ04441.1 | AKI98949.1 | AA314_06067 | AA314_00576 | Putative transmembrane protein. | Methanol oxidation genes, glmU-like protein. | 0.405 |
AKJ04441.1 | AKJ04375.1 | AA314_06067 | AA314_06001 | Putative transmembrane protein. | Hypothetical protein; Belongs to the sulfur carrier protein TusA family. | 0.560 |
AKJ04441.1 | AKJ04440.1 | AA314_06067 | AA314_06066 | Putative transmembrane protein. | RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. | 0.499 |
AKJ04441.1 | AKJ04442.1 | AA314_06067 | AA314_06068 | Putative transmembrane protein. | Hypothetical protein. | 0.958 |
AKJ04441.1 | AKJ04713.1 | AA314_06067 | AA314_06339 | Putative transmembrane protein. | Rhodanese-like domain protein; Belongs to the sulfur carrier protein TusA family. | 0.560 |
AKJ04441.1 | AKJ04829.1 | AA314_06067 | AA314_06455 | Putative transmembrane protein. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.408 |
AKJ04441.1 | AKJ05399.1 | AA314_06067 | AA314_07025 | Putative transmembrane protein. | Phosphoenolpyruvate-protein phosphotransferase of PTS system; Belongs to the PEP-utilizing enzyme family. | 0.510 |
AKJ04441.1 | cysI | AA314_06067 | AA314_06453 | Putative transmembrane protein. | Sulfite reductase [NADPH] hemoprotein beta-component; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.454 |
AKJ04442.1 | AKI98949.1 | AA314_06068 | AA314_00576 | Hypothetical protein. | Methanol oxidation genes, glmU-like protein. | 0.408 |
AKJ04442.1 | AKJ04375.1 | AA314_06068 | AA314_06001 | Hypothetical protein. | Hypothetical protein; Belongs to the sulfur carrier protein TusA family. | 0.560 |
AKJ04442.1 | AKJ04440.1 | AA314_06068 | AA314_06066 | Hypothetical protein. | RNA polymerase sigma-54 factor RpoN; Belongs to the sigma-70 factor family. ECF subfamily. | 0.499 |
AKJ04442.1 | AKJ04441.1 | AA314_06068 | AA314_06067 | Hypothetical protein. | Putative transmembrane protein. | 0.958 |
AKJ04442.1 | AKJ04713.1 | AA314_06068 | AA314_06339 | Hypothetical protein. | Rhodanese-like domain protein; Belongs to the sulfur carrier protein TusA family. | 0.560 |
AKJ04442.1 | AKJ04829.1 | AA314_06068 | AA314_06455 | Hypothetical protein. | Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.408 |
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