STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04450.1Hypothetical protein. (1474 aa)    
Predicted Functional Partners:
AKI98448.1
Hypothetical protein.
  
     0.775
AKJ00175.1
Hypothetical protein.
  
     0.775
AKJ06182.1
Branched-chain amino acid ABC transporter, amino acid-binding protein.
  
     0.775
AKI98920.1
Hypothetical protein.
  
     0.772
AKI99889.1
Hypothetical protein.
  
    0.770
AKJ03368.1
Glycine amidinotransferase.
  
     0.767
AKJ01823.1
Hypothetical protein.
  
     0.765
AKI98532.1
Putative carbohydrate-binding protein.
  
     0.764
AKJ01520.1
Heme oxygenase.
  
     0.763
AKJ03240.1
Hypothetical protein.
  
     0.750
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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