STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04452.1Hypothetical protein. (377 aa)    
Predicted Functional Partners:
AKJ04453.1
Hypothetical protein; Belongs to the LOG family.
       0.773
AKI99284.1
Hypothetical protein.
  
     0.493
AKJ04451.1
Polysaccharide deacetylase domain protein.
       0.463
AKJ04959.1
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
    0.457
AKJ05249.1
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
    0.457
AKI98787.1
MgtC family.
 
     0.455
AKJ02495.1
Peptidase, M23/M37 family.
  
    0.438
AKJ03431.1
M23 peptidase domain protein.
  
    0.438
AKJ08019.1
Peptidase, M23/M37 family.
  
    0.438
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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