STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04462.1Ser/Thr and Tyr protein phosphatase. (232 aa)    
Predicted Functional Partners:
lepA
Translation elongation factor LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
    
  0.878
AKJ07375.1
Chaperone protein DnaK.
   
 0.683
AKI98813.1
Hypothetical protein.
    
 0.648
AKJ03306.1
Hypothetical protein.
    
 0.648
AKJ05218.1
Hypothetical protein.
    
 0.648
AKJ05900.1
Hypothetical protein.
  
     0.612
AKJ03316.1
Sterol desaturase.
  
     0.610
AKJ05391.1
Internalin, putative.
  
     0.566
AKI99276.1
Hypothetical protein.
  
     0.558
AKI99794.1
Peptidyl-prolyl cis-trans isomerase PpiD.
  
     0.536
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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