STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04542.1PIN domain protein. (153 aa)    
Predicted Functional Partners:
AKJ04541.1
High-affnity carbon uptake protein Hat/HatR.
       0.773
AKJ07886.1
Protein-N(5)-glutamine methyltransferase PrmC; Methylates polypeptide chain release factors RF1 and RF2; Belongs to the methyltransferase superfamily.
  
     0.729
AKJ04778.1
TRAP transporter solute receptor, TAXI family.
  
     0.611
AKI99389.1
Ortho-halobenzoate 1,2-dioxygenase beta-ISP protein OhbA.
  
     0.585
AKJ05364.1
Methylmalonyl-CoA epimerase.
  
     0.559
AKJ05675.1
Hypothetical protein.
 
     0.513
AKJ04540.1
Sensor histidine kinase.
       0.492
AKJ05957.1
SET domain protein.
  
     0.465
AKJ05271.1
TRAP-type transport system protein.
  
     0.463
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.