STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ04711.1Hypothetical protein. (287 aa)    
Predicted Functional Partners:
AKJ04712.1
ABC transporter, ATP-binding protein.
  
 
 0.870
AKJ04710.1
Cell division protein FtsI.
     
 0.545
AKJ04774.1
Pectin lyase like protein.
  
 
 0.471
AKJ04970.1
Putative lipoprotein.
  
 
 0.471
AKJ07393.1
Putative lipoprotein.
  
 
 0.471
AKJ07395.1
Putative lipoprotein.
  
 
 0.471
AKJ03579.1
Hypothetical protein.
  
 
 0.440
AKI98410.1
ABC transporter ATP-binding protein.
  
 
 0.424
AKI98412.1
ABC-type multidrug transport system, ATPase component.
  
 
 0.424
AKI99887.1
ABC transporter, ATP-binding protein.
  
 
 0.424
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.