Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ05221.1 | AKJ05222.1 | AA314_06847 | AA314_06848 | Putative regulatory protein. | Hydrolase. | 0.775 |
AKJ05221.1 | AKJ05223.1 | AA314_06847 | AA314_06849 | Putative regulatory protein. | Transcriptional regulator, AsnC family. | 0.482 |
AKJ05222.1 | AKJ05221.1 | AA314_06848 | AA314_06847 | Hydrolase. | Putative regulatory protein. | 0.775 |
AKJ05222.1 | AKJ05223.1 | AA314_06848 | AA314_06849 | Hydrolase. | Transcriptional regulator, AsnC family. | 0.515 |
AKJ05223.1 | AKJ05221.1 | AA314_06849 | AA314_06847 | Transcriptional regulator, AsnC family. | Putative regulatory protein. | 0.482 |
AKJ05223.1 | AKJ05222.1 | AA314_06849 | AA314_06848 | Transcriptional regulator, AsnC family. | Hydrolase. | 0.515 |
AKJ05223.1 | AKJ07258.1 | AA314_06849 | AA314_08884 | Transcriptional regulator, AsnC family. | Glutamate synthase [NADPH] large chain. | 0.468 |
AKJ05223.1 | acpP | AA314_06849 | AA314_04145 | Transcriptional regulator, AsnC family. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.412 |
AKJ07258.1 | AKJ05223.1 | AA314_08884 | AA314_06849 | Glutamate synthase [NADPH] large chain. | Transcriptional regulator, AsnC family. | 0.468 |
acpP | AKJ05223.1 | AA314_04145 | AA314_06849 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Transcriptional regulator, AsnC family. | 0.412 |