STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ07690.1Putative oxidoreductase. (364 aa)    
Predicted Functional Partners:
AKJ07694.1
Transferase.
 
  
 0.935
AKJ07693.1
Hypothetical protein.
 
  
 0.931
AKJ07691.1
Pyoverdine chromophore precursor synthetase PvdL.
 
   
 0.823
AKJ07692.1
Acyl carrier protein.
       0.801
AKJ07680.1
Chalcone synthase.
 
  
 0.560
AKJ06942.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.538
AKI99599.1
Dehydrogenase flavoprotein LodB.
  
     0.519
AKJ06941.1
Electron transfer flavoprotein, alpha subunit.
  
 
 0.513
AKI98907.1
Phytoene synthase.
  
  
 0.511
AKJ00241.1
Phytoene synthase.
  
  
 0.511
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.