STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKJ07998.1Two component heavy metal response transcriptional regulator, winged helix family. (174 aa)    
Predicted Functional Partners:
AKJ07997.1
Sensory transduction histidine kinase.
 
 
   0.921
AKJ02455.1
Response regulator.
  
   0.783
AKJ03001.1
Response regulator receiver protein.
 
 
   0.777
AKI99724.1
Chemotaxis regulator.
  
   0.776
AKJ05453.1
CoB--CoM heterodisulfide reductase subunit A.
  
     0.774
AKJ06433.1
DNA-binding response regulator.
  
 
   0.774
AKJ02691.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 
   0.771
AKJ04847.1
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
  
 
   0.771
AKJ05977.1
Phosphate regulon transcriptional regulatory protein PhoB.
  
    0.769
AKJ01840.1
Sensor histidine kinase.
  
   0.768
Your Current Organism:
Archangium gephyra
NCBI taxonomy Id: 48
Other names: A. gephyra, ATCC 25201, Chondrococcus cerebriformis, Chondromyces serpens, DSM 2261, Myxococcus cerebriformis
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