Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKJ02353.1 | AKJ08397.1 | AA314_03979 | AA314_10023 | Substrate-specific component BioY of biotin ECF transporter. | Substrate-specific component BioY of biotin ECF transporter. | 0.915 |
AKJ02353.1 | AKJ08398.1 | AA314_03979 | AA314_10024 | Substrate-specific component BioY of biotin ECF transporter. | Transmembrane component BioN of energizing module of biotin ECF transporter. | 0.979 |
AKJ02353.1 | AKJ08399.1 | AA314_03979 | AA314_10025 | Substrate-specific component BioY of biotin ECF transporter. | ATPase component BioM of energizing module of biotin ECF transporter. | 0.968 |
AKJ02353.1 | bioB | AA314_03979 | AA314_02519 | Substrate-specific component BioY of biotin ECF transporter. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.429 |
AKJ02353.1 | bioD | AA314_03979 | AA314_02521 | Substrate-specific component BioY of biotin ECF transporter. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.481 |
AKJ02353.1 | birA | AA314_03979 | AA314_06048 | Substrate-specific component BioY of biotin ECF transporter. | Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.688 |
AKJ06836.1 | AKJ08397.1 | AA314_08462 | AA314_10023 | 3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Substrate-specific component BioY of biotin ECF transporter. | 0.408 |
AKJ06836.1 | birA | AA314_08462 | AA314_06048 | 3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.517 |
AKJ08396.1 | AKJ08397.1 | AA314_10022 | AA314_10023 | Hypothetical protein. | Substrate-specific component BioY of biotin ECF transporter. | 0.508 |
AKJ08396.1 | AKJ08398.1 | AA314_10022 | AA314_10024 | Hypothetical protein. | Transmembrane component BioN of energizing module of biotin ECF transporter. | 0.508 |
AKJ08396.1 | AKJ08399.1 | AA314_10022 | AA314_10025 | Hypothetical protein. | ATPase component BioM of energizing module of biotin ECF transporter. | 0.508 |
AKJ08397.1 | AKJ02353.1 | AA314_10023 | AA314_03979 | Substrate-specific component BioY of biotin ECF transporter. | Substrate-specific component BioY of biotin ECF transporter. | 0.915 |
AKJ08397.1 | AKJ06836.1 | AA314_10023 | AA314_08462 | Substrate-specific component BioY of biotin ECF transporter. | 3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.408 |
AKJ08397.1 | AKJ08396.1 | AA314_10023 | AA314_10022 | Substrate-specific component BioY of biotin ECF transporter. | Hypothetical protein. | 0.508 |
AKJ08397.1 | AKJ08398.1 | AA314_10023 | AA314_10024 | Substrate-specific component BioY of biotin ECF transporter. | Transmembrane component BioN of energizing module of biotin ECF transporter. | 0.998 |
AKJ08397.1 | AKJ08399.1 | AA314_10023 | AA314_10025 | Substrate-specific component BioY of biotin ECF transporter. | ATPase component BioM of energizing module of biotin ECF transporter. | 0.997 |
AKJ08397.1 | AKJ08400.1 | AA314_10023 | AA314_10026 | Substrate-specific component BioY of biotin ECF transporter. | NADH dehydrogenase. | 0.449 |
AKJ08397.1 | bioB | AA314_10023 | AA314_02519 | Substrate-specific component BioY of biotin ECF transporter. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.429 |
AKJ08397.1 | bioD | AA314_10023 | AA314_02521 | Substrate-specific component BioY of biotin ECF transporter. | Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.481 |
AKJ08397.1 | birA | AA314_10023 | AA314_06048 | Substrate-specific component BioY of biotin ECF transporter. | Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.678 |
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