STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900162695_03581Unannotated protein. (252 aa)    
Predicted Functional Partners:
GCA_900162695_00897
Unannotated protein.
  
   0.801
GCA_900162695_03790
Unannotated protein.
   
 0.716
GCA_900162695_01626
Unannotated protein.
  
    0.679
GCA_900162695_00304
Unannotated protein.
   
 
 0.663
GCA_900162695_01418
Unannotated protein.
   
 
 0.663
GCA_900162695_01419
Unannotated protein.
   
 
 0.663
GCA_900162695_02018
Unannotated protein.
   
 
 0.663
GCA_900162695_02541
Unannotated protein.
   
 
 0.663
GCA_900162695_01731
Unannotated protein.
  
   0.639
GCA_900162695_02350
Unannotated protein.
  
   0.639
Your Current Organism:
Virgibacillus siamensis
NCBI taxonomy Id: 480071
Other names: JCM 15395, PCU 312, PCU:312, V. siamensis, Virgibacillus siamensis Tanasupawat et al. 2011, strain MS3-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.