STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOW46006.1Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)    
Predicted Functional Partners:
A4S02_01815
DNA topoisomerase I; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.861
AOW46063.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.781
AOW45943.1
DNA repair protein RadC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.
 
    0.747
AOW47758.1
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
       0.692
tyrC
Cyclohexadienyl dehydrogenase; Dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.652
AOW46007.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.649
AOW46005.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.648
aprT
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.631
AOW45942.1
DNA repair protein RadC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.618
nagA
N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.572
Your Current Organism:
Acetobacter ascendens
NCBI taxonomy Id: 481146
Other names: A. ascendens, Acetobacter pasteurianus subsp. ascendens, Acetobacter pasteurianus subsp. paradoxus, Bacterium ascendans, CCUG 18128, LMD 51.1, LMD 53.6 [[Acetobacter pasteurianus subsp. paradoxus]], NCCB 51001, NCCB 53006 [[Acetobacter pasteurianus subsp. paradoxus]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.