STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001642835_00557Unannotated protein. (405 aa)    
Predicted Functional Partners:
GCA_001642835_00136
Unannotated protein.
 0.996
GCA_001642835_00556
Unannotated protein.
 
  0.994
GCA_001642835_00558
Unannotated protein.
 
  0.977
GCA_001642835_00632
Unannotated protein.
  
 
  0.957
GCA_001642835_00973
Unannotated protein.
 
 
  0.954
GCA_001642835_01595
Unannotated protein.
 
 
 0.952
GCA_001642835_03036
Unannotated protein.
  
 
  0.949
GCA_001642835_00960
Unannotated protein.
  
  0.947
GCA_001642835_02494
Unannotated protein.
  
 
  0.943
GCA_001642835_00785
Unannotated protein.
  
  0.912
Your Current Organism:
Tamlana agarivorans
NCBI taxonomy Id: 481183
Other names: CCUG 55327, KCTC 22176, T. agarivorans, Tamlana agarivorans Yoon et al. 2008, strain JW-26
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.