STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRL13998.1NADH dehydrogenase. (128 aa)    
Predicted Functional Partners:
CRL14000.1
Hypothetical protein.
 
     0.874
CRL12995.1
Hypothetical protein; ETC complex I subunit conserved region.
  
    0.775
mlaD
Putative phospholipid ABC transporter-binding protein MlaD.
       0.711
atpE
Lipid-binding protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
  
     0.629
CRL15828.1
Mitochondrial import inner membrane, translocase subunit.
  
     0.604
CRL16677.1
GcrA cell cycle regulator.
  
     0.603
CRL14786.1
Hypothetical protein.
  
     0.592
cycM
Cytochrome c552.
  
     0.570
CRL14823.1
Hypothetical protein; Belongs to the UPF0262 family.
  
     0.562
CRL15069.1
Hypothetical protein.
  
   
 0.557
Your Current Organism:
Phaeobacter italicus
NCBI taxonomy Id: 481446
Other names: Aquamarinicola italica, CCUG 55857, CECT 7645, DSM 26436, LMG 24365, LMG:24365, Nautella italica, Nautella italica Vandecandelaere et al. 2009, P. italicus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.