STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysESerine acetyltransferase. (272 aa)    
Predicted Functional Partners:
cbs
Putative cystathionine beta-synthase.
  
 0.997
cysS
Cysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.978
tdcG
L-serine dehydratase TdcG; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.930
serB
Phosphoserine phosphatase.
    
 0.927
CRL16643.1
Soluble hydrogenase 42 kDa subunit.
  
  
 0.843
glyA1
Serine hydroxymethyltransferase 1; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.818
glyA
Fluorothreonine transaldolase.
     
 0.818
hom
Homoserine dehydrogenase.
     
 0.816
trpA
Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
     
 0.807
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
     
 0.806
Your Current Organism:
Phaeobacter italicus
NCBI taxonomy Id: 481446
Other names: Aquamarinicola italica, CCUG 55857, CECT 7645, DSM 26436, LMG 24365, LMG:24365, Nautella italica, Nautella italica Vandecandelaere et al. 2009, P. italicus
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.