STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
traG_2Conjugal transfer protein TraG. (558 aa)    
Predicted Functional Partners:
CRL14698.1
Replication initiator protein A.
 
     0.801
CRL14699.1
ParA-like protein.
 
     0.789
mobA_2
DNA strand transferase.
 
   
 0.782
CRL14695.1
Hypothetical protein.
       0.773
traC_2
DNA primase TraC.
 
    0.727
mobA_1
DNA strand transferase.
 
   
 0.723
CRL14697.1
Hypothetical protein.
       0.723
CRL14357.1
HNH endonuclease.
   
 
 0.536
CRL16269.1
Hypothetical protein.
   
 
 0.536
CRL14711.1
Hypothetical protein.
  
     0.534
Your Current Organism:
Phaeobacter italicus
NCBI taxonomy Id: 481446
Other names: Aquamarinicola italica, CCUG 55857, CECT 7645, DSM 26436, LMG 24365, LMG:24365, Nautella italica, Nautella italica Vandecandelaere et al. 2009, P. italicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.