Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acpP_1 | bfmBAB | NIT7645_01346 | NIT7645_01512 | Acyl carrier protein. | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.672 |
acpP_1 | fabB | NIT7645_01346 | NIT7645_02536 | Acyl carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase 1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.822 |
acpP_1 | fabF_2 | NIT7645_01346 | NIT7645_01534 | Acyl carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.850 |
acpP_1 | gcvH_1 | NIT7645_01346 | NIT7645_02616 | Acyl carrier protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.687 |
acpP_1 | gcvH_2 | NIT7645_01346 | NIT7645_03638 | Acyl carrier protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.687 |
acpP_1 | lipB | NIT7645_01346 | NIT7645_02736 | Acyl carrier protein. | Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.772 |
acpP_1 | ppsE | NIT7645_01346 | NIT7645_02596 | Acyl carrier protein. | Beta-ketoacyl-acyl-carrier-protein synthase I. | 0.958 |
acpP_2 | bfmBAB | NIT7645_01536 | NIT7645_01512 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.672 |
acpP_2 | fabB | NIT7645_01536 | NIT7645_02536 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-[acyl-carrier-protein] synthase 1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.946 |
acpP_2 | fabF_2 | NIT7645_01536 | NIT7645_01534 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.972 |
acpP_2 | gcvH_1 | NIT7645_01536 | NIT7645_02616 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.687 |
acpP_2 | gcvH_2 | NIT7645_01536 | NIT7645_03638 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.687 |
acpP_2 | lipB | NIT7645_01536 | NIT7645_02736 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.772 |
acpP_2 | ppsE | NIT7645_01536 | NIT7645_02596 | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Beta-ketoacyl-acyl-carrier-protein synthase I. | 0.964 |
bfmBAB | acpP_1 | NIT7645_01512 | NIT7645_01346 | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acyl carrier protein. | 0.672 |
bfmBAB | acpP_2 | NIT7645_01512 | NIT7645_01536 | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.672 |
bfmBAB | fabB | NIT7645_01512 | NIT7645_02536 | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 3-oxoacyl-[acyl-carrier-protein] synthase 1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.630 |
bfmBAB | fabF_2 | NIT7645_01512 | NIT7645_01534 | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.630 |
bfmBAB | gcvH_1 | NIT7645_01512 | NIT7645_02616 | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.902 |
bfmBAB | gcvH_2 | NIT7645_01512 | NIT7645_03638 | 2-oxoisovalerate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.902 |
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