STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thiBThiamine-binding periplasmic protein precursor. (325 aa)    
Predicted Functional Partners:
cysW_1
Sulfate transport system permease protein CysW.
 
 
 0.996
thiQ
Thiamine import ATP-binding protein ThiQ; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.
 
 
  0.990
phnU
Putative 2-aminoethylphosphonate transport system permease protein PhnU.
  
 
 0.626
opuCA
Carnitine transport ATP-binding protein OpuCA.
    
  0.491
Your Current Organism:
Phaeobacter italicus
NCBI taxonomy Id: 481446
Other names: Aquamarinicola italica, CCUG 55857, CECT 7645, DSM 26436, LMG 24365, LMG:24365, Nautella italica, Nautella italica Vandecandelaere et al. 2009, P. italicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.