STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRL16686.1Putative assembly protein. (650 aa)    
Predicted Functional Partners:
CRL14211.1
Hypothetical protein.
  
     0.631
CRL14082.1
Hypothetical protein.
  
     0.612
opmA
Porin.
  
     0.611
proV
Glycine betaine/L-proline transport ATP-binding protein ProV.
       0.450
opuAB
Glycine betaine transport system permease protein OpuAB.
       0.450
CRL14105.1
Hypothetical protein.
  
     0.430
CRL13280.1
Hypothetical protein.
  
     0.420
CRL14943.1
Hypothetical protein.
 
     0.419
CRL16169.1
Hypothetical protein.
  
     0.412
CRL16633.1
Low-molecular weight cobalt-containing nitrile hydratase subunit beta; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
  
     0.410
Your Current Organism:
Phaeobacter italicus
NCBI taxonomy Id: 481446
Other names: Aquamarinicola italica, CCUG 55857, CECT 7645, DSM 26436, LMG 24365, LMG:24365, Nautella italica, Nautella italica Vandecandelaere et al. 2009, P. italicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.