Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Minf_0051 | moaB | Minf_0051 | Minf_0053 | Conserved hypothetical protein. | Molybdopterin biosynthesis enzyme. | 0.497 |
Minf_0051 | moaC | Minf_0051 | Minf_0052 | Conserved hypothetical protein. | Molybdenum cofactor biosynthesis enzyme. | 0.497 |
Minf_0051 | prfB | Minf_0051 | Minf_0050 | Conserved hypothetical protein. | Protein chain release factor B; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.444 |
moaB | Minf_0051 | Minf_0053 | Minf_0051 | Molybdopterin biosynthesis enzyme. | Conserved hypothetical protein. | 0.497 |
moaB | moaC | Minf_0053 | Minf_0052 | Molybdopterin biosynthesis enzyme. | Molybdenum cofactor biosynthesis enzyme. | 0.998 |
moaC | Minf_0051 | Minf_0052 | Minf_0051 | Molybdenum cofactor biosynthesis enzyme. | Conserved hypothetical protein. | 0.497 |
moaC | moaB | Minf_0052 | Minf_0053 | Molybdenum cofactor biosynthesis enzyme. | Molybdopterin biosynthesis enzyme. | 0.998 |
prfB | Minf_0051 | Minf_0050 | Minf_0051 | Protein chain release factor B; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | Conserved hypothetical protein. | 0.444 |