Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nrfGTPR repeats containing protein. (855 aa)    
Predicted Functional Partners:
holA
DNA polymerase III, delta subunit.
 
     0.781
Minf_1290
Conserved hypothetical protein.
 
     0.781
nrfG-4
TPR repeats containing protein.
  
   
 0.779
imp
Organic solvent tolerance protein OstA.
  
   
 0.778
Minf_2117
Beta-propeller repeats containing protein.
 
    0.778
Minf_1241
Conserved hypothetical protein.
  
     0.774
Minf_1488
Conserved hypothetical protein.
  
     0.774
uvrA
Excinuclease ABC subunit A, ATPase; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
       0.773
Minf_2095
Conserved hypothetical protein.
  
     0.773
Minf_2444
Stand-alone CHASE2 sensor domain.
  
     0.773
Your Current Organism:
Methylacidiphilum infernorum
NCBI taxonomy Id: 481448
Other names: M. infernorum V4, Methylacidiphilum infernorum V4, Methylacidiphilum infernorum str. V4, Methylacidiphilum infernorum strain V4, Verrucomicrobia bacterium V4, Verrucomicrobiae bacterium V4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.