Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
exo | gltB | Minf_0486 | Minf_2281 | 5'-3' exonuclease. | Glutamate synthase domain large chain. | 0.493 |
exo | proP-2 | Minf_0486 | Minf_0488 | 5'-3' exonuclease. | Permease of the major facilitator superfamily. | 0.518 |
exo | sufA-5 | Minf_0486 | Minf_0487 | 5'-3' exonuclease. | Fe-S cluster assembly scaffold protein; Belongs to the HesB/IscA family. | 0.576 |
gltB | exo | Minf_2281 | Minf_0486 | Glutamate synthase domain large chain. | 5'-3' exonuclease. | 0.493 |
gltB | proP-2 | Minf_2281 | Minf_0488 | Glutamate synthase domain large chain. | Permease of the major facilitator superfamily. | 0.408 |
proP-2 | exo | Minf_0488 | Minf_0486 | Permease of the major facilitator superfamily. | 5'-3' exonuclease. | 0.518 |
proP-2 | gltB | Minf_0488 | Minf_2281 | Permease of the major facilitator superfamily. | Glutamate synthase domain large chain. | 0.408 |
proP-2 | sufA-5 | Minf_0488 | Minf_0487 | Permease of the major facilitator superfamily. | Fe-S cluster assembly scaffold protein; Belongs to the HesB/IscA family. | 0.678 |
sufA-5 | exo | Minf_0487 | Minf_0486 | Fe-S cluster assembly scaffold protein; Belongs to the HesB/IscA family. | 5'-3' exonuclease. | 0.576 |
sufA-5 | proP-2 | Minf_0487 | Minf_0488 | Fe-S cluster assembly scaffold protein; Belongs to the HesB/IscA family. | Permease of the major facilitator superfamily. | 0.678 |