STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grxCGlutaredoxin. (87 aa)    
Predicted Functional Partners:
nrdA
Oxygen-sensitive ribonucleotide reductase, alpha subunit fused to ATP-cone domains; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 0.953
msrA
Methionine sulfoxide reductase with associated domain; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
 
 0.857
Minf_1943
Conserved hypothetical protein.
  
     0.716
ywfI
Predicted heme peroxidase involved in anaerobic stress response.
       0.656
Minf_1553
Predicted deacylase.
  
     0.650
Minf_1044
Conserved hypothetical protein, DUF407 family.
  
     0.621
Minf_2050
Conserved hypothetical protein.
 
    0.591
rpsA-2
Ribosomal protein S1.
 
    0.548
sufE
Cysteine desulfurase SufE subunit.
  
     0.522
gloB
Zn-dependent hydrolase, glyoxylase family.
  
  
 0.507
Your Current Organism:
Methylacidiphilum infernorum
NCBI taxonomy Id: 481448
Other names: M. infernorum V4, Methylacidiphilum infernorum V4, Methylacidiphilum infernorum str. V4, Methylacidiphilum infernorum strain V4, Verrucomicrobia bacterium V4, Verrucomicrobiae bacterium V4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.