STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoB-2Heme/copper-type cytochrome oxidase, subunit 1. (561 aa)    
Predicted Functional Partners:
cyoA
Heme/copper-type cytochrome oxidase, subunit 2.
 
 0.999
cyoC
Heme/copper-type cytochrome oxidase, subunit 3.
 
 0.998
cyoA-2
Heme/copper-type cytochrome oxidase, subunit 2.
 
 0.996
cccA
Cytochrome c family protein.
   
 0.942
cyoB
Heme/copper-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 
0.920
cyoB-3
Heme/copper-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
  
 
0.919
ccoO
Cbb3-type cytochrome oxidase, cytochrome c subunit.
     
 0.906
Minf_1949
Predicted small integral membrane protein.
    
  0.903
ccoN
Cbb3-type cytochrome oxidase, subunit 1.
    
 0.903
nuoM
NADH dehydrogenase subunit M.
   
 
 0.890
Your Current Organism:
Methylacidiphilum infernorum
NCBI taxonomy Id: 481448
Other names: M. infernorum V4, Methylacidiphilum infernorum V4, Methylacidiphilum infernorum str. V4, Methylacidiphilum infernorum strain V4, Verrucomicrobia bacterium V4, Verrucomicrobiae bacterium V4
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