STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
osmCOrganic hydroperoxide reductase. (146 aa)    
Predicted Functional Partners:
Minf_1086
Hypothetical protein.
       0.572
Minf_0832
Inactivated superfamily I helicase and RecB family exonuclease.
  
    0.522
msrA
Methionine sulfoxide reductase with associated domain; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.514
mipB-2
Transaldolase.
  
    0.501
Minf_2021
UspA family protein.
  
  
 0.442
Minf_0547
VPS10 repeats containing protein.
  
     0.440
holA
DNA polymerase III, delta subunit.
 
     0.424
cccA-2
Cytochrome c family protein.
  
     0.414
Minf_1757
Predicted flavoprotein.
 
  
 0.413
cirA
Outer membrane receptor protein, mostly Fe transport.
  
   
 0.400
Your Current Organism:
Methylacidiphilum infernorum
NCBI taxonomy Id: 481448
Other names: M. infernorum V4, Methylacidiphilum infernorum V4, Methylacidiphilum infernorum str. V4, Methylacidiphilum infernorum strain V4, Verrucomicrobia bacterium V4, Verrucomicrobiae bacterium V4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.