STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Minf_1869NifX-associated protein. (156 aa)    
Predicted Functional Partners:
Minf_1870
Nitrogenase molybdenum-cofactor protein NifX.
 
  
 0.957
nifD
Nitrogenase molybdenum-cofactor synthesis protein NifN.
 
    0.948
nifD-2
Nitrogenase molybdenum-cofactor synthesis protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.850
nifD-3
Nitrogenase molybdenum-cofactor protein, beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
    0.847
nifW
Nitrogen fixation protein NifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
 
  
 0.843
Minf_0468
Nitrogen fixation protein FixU.
 
    0.835
Minf_0453
FeMo cofactor biosynthesis protein NifB, Radical SAM superfamily enzyme.
 
  
 0.820
Minf_0471
Conserved hypothetical protein.
 
    0.813
Minf_0460
NifQ family protein.
 
    0.802
nifD-4
Nitrogenase molybdenum-cofactor protein, alpha chain.
 
    0.802
Your Current Organism:
Methylacidiphilum infernorum
NCBI taxonomy Id: 481448
Other names: M. infernorum V4, Methylacidiphilum infernorum V4, Methylacidiphilum infernorum str. V4, Methylacidiphilum infernorum strain V4, Verrucomicrobia bacterium V4, Verrucomicrobiae bacterium V4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.