Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Minf_1380 | Minf_1488 | Minf_1380 | Minf_1488 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.532 |
Minf_1380 | Minf_1808 | Minf_1380 | Minf_1808 | Conserved hypothetical protein. | Endopolygalacturonase. | 0.490 |
Minf_1380 | nrfG-3 | Minf_1380 | Minf_0716 | Conserved hypothetical protein. | TPR repeats containing protein. | 0.412 |
Minf_1380 | smtA-17 | Minf_1380 | Minf_2004 | Conserved hypothetical protein. | SAM-dependent methyltransferase. | 0.468 |
Minf_1380 | virB4 | Minf_1380 | Minf_1198 | Conserved hypothetical protein. | Type IV secretory pathway, VirB4 component. | 0.443 |
Minf_1488 | Minf_1380 | Minf_1488 | Minf_1380 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.532 |
Minf_1488 | Minf_1645 | Minf_1488 | Minf_1645 | Conserved hypothetical protein. | Predicted membrane protein. | 0.565 |
Minf_1488 | Minf_1808 | Minf_1488 | Minf_1808 | Conserved hypothetical protein. | Endopolygalacturonase. | 0.780 |
Minf_1488 | nrfG-3 | Minf_1488 | Minf_0716 | Conserved hypothetical protein. | TPR repeats containing protein. | 0.773 |
Minf_1488 | smtA-17 | Minf_1488 | Minf_2004 | Conserved hypothetical protein. | SAM-dependent methyltransferase. | 0.455 |
Minf_1488 | smtA-6 | Minf_1488 | Minf_0495 | Conserved hypothetical protein. | SAM-dependent methyltransferase. | 0.778 |
Minf_1488 | virB4 | Minf_1488 | Minf_1198 | Conserved hypothetical protein. | Type IV secretory pathway, VirB4 component. | 0.772 |
Minf_1645 | Minf_1488 | Minf_1645 | Minf_1488 | Predicted membrane protein. | Conserved hypothetical protein. | 0.565 |
Minf_1645 | Minf_1808 | Minf_1645 | Minf_1808 | Predicted membrane protein. | Endopolygalacturonase. | 0.477 |
Minf_1645 | nrfG-3 | Minf_1645 | Minf_0716 | Predicted membrane protein. | TPR repeats containing protein. | 0.439 |
Minf_1645 | smtA-17 | Minf_1645 | Minf_2004 | Predicted membrane protein. | SAM-dependent methyltransferase. | 0.491 |
Minf_1645 | virB4 | Minf_1645 | Minf_1198 | Predicted membrane protein. | Type IV secretory pathway, VirB4 component. | 0.547 |
Minf_1808 | Minf_1380 | Minf_1808 | Minf_1380 | Endopolygalacturonase. | Conserved hypothetical protein. | 0.490 |
Minf_1808 | Minf_1488 | Minf_1808 | Minf_1488 | Endopolygalacturonase. | Conserved hypothetical protein. | 0.780 |
Minf_1808 | Minf_1645 | Minf_1808 | Minf_1645 | Endopolygalacturonase. | Predicted membrane protein. | 0.477 |
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