STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppDABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (291 aa)    
Predicted Functional Partners:
dppC
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.999
dppC-2
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  
 0.998
appF
ABC-type oligopeptide transport system, ATPase component.
 
 
0.996
dppB
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.993
oppA
ABC-type oligopeptide transport system, periplasmic component.
 
 
 0.987
dppB-2
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 
 0.986
ccmA
ABC-type multidrug transport system, ATPase component.
     
0.897
ddpA
ABC-type dipeptide transport system, periplasmic component.
 
  
 0.836
Minf_2134
SAM-dependent methyltransferase.
       0.776
malK
ABC-type molybdate transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
    
0.559
Your Current Organism:
Methylacidiphilum infernorum
NCBI taxonomy Id: 481448
Other names: M. infernorum V4, Methylacidiphilum infernorum V4, Methylacidiphilum infernorum str. V4, Methylacidiphilum infernorum strain V4, Verrucomicrobia bacterium V4, Verrucomicrobiae bacterium V4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.