STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX63049.1PFAM: Carboxylesterase type B; KEGG: pjd:Pjdr2_2959 carboxylesterase type B; Belongs to the type-B carboxylesterase/lipase family. (492 aa)    
Predicted Functional Partners:
ACX63048.1
PFAM: protein of unknown function DUF81; KEGG: pjd:Pjdr2_2960 protein of unknown function DUF81.
       0.803
ACX62555.1
PFAM: peptidase M28; peptidase M20; KEGG: sgr:SGR_2597 M28 family peptidase.
  
 0.575
ACX63050.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pjd:Pjdr2_2958 transcriptional regulator, LysR family.
       0.549
rpsD
Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
    
  0.533
ACX66278.1
KEGG: pjd:Pjdr2_3343 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase-associated domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein.
    
 0.504
ACX64141.1
PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: pjd:Pjdr2_1654 glucose-methanol-choline oxidoreductase.
  
   
 0.479
ACX64464.1
PFAM: RNA binding S1 domain protein; KEGG: pjd:Pjdr2_2386 RNA binding S1 domain protein.
   
 
  0.478
ACX68241.1
PFAM: Epoxide hydrolase domain protein; KEGG: cac:CAC0719 epoxide hydrolase.
 
  
 0.409
ACX63051.1
Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: ate:Athe_2642 transcriptional regulator, AraC family.
       0.406
ACX65034.1
PFAM: cytochrome P450; FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bsu:BSU07250 hypothetical protein.
  
 
 
 0.406
Your Current Organism:
Paenibacillus sp. Y412MC10
NCBI taxonomy Id: 481743
Other names: P. sp. Y412MC10
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