STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX63402.1RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: afl:Aflv_0147 RNA polymerase sigma factor SigW; Belongs to the sigma-70 factor family. ECF subfamily. (308 aa)    
Predicted Functional Partners:
ACX63401.1
Transcriptional regulator, ArsR family; PFAM: Protein of unknown function DUF2087; regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pjd:Pjdr2_5726 transcriptional regulator, ArsR family.
       0.773
ACX67740.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bld:BLi04109 RNA polymerase sigma factor SigY; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.772
ACX62889.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, SigM family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bai:BAA_3359 RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.770
ACX65141.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pjd:Pjdr2_4511 RNA polymerase, sigma-24 subunit, ECF subfamily.
  
     0.770
ACX65168.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: bbe:BBR47_47260 RNA polymerase ECF-type sigma factor.
  
     0.769
ACX63403.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: oih:OB0299 hypothetical protein.
 
    
0.595
ACX68381.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: ckr:CKR_1639 hypothetical protein.
  
     0.583
ACX67224.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bbe:BBR47_42420 RNA polymerase ECF-type sigma factor.
  
     0.548
ACX66073.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bbe:BBR47_06980 hypothetical protein.
  
     0.528
ACX67909.1
KEGG: pjd:Pjdr2_5632 putative transmembrane anti-sigma factor.
 
 
 0.445
Your Current Organism:
Paenibacillus sp. Y412MC10
NCBI taxonomy Id: 481743
Other names: P. sp. Y412MC10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.