STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX63678.1Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: amt:Amet_3941 regulatory protein GntR, HTH. (128 aa)    
Predicted Functional Partners:
ACX63677.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY4854 hypothetical protein.
 
  
 0.958
ACX63676.1
KEGG: amt:Amet_3943 hypothetical protein.
 
     0.905
ACX66047.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pjd:Pjdr2_5968 ABC transporter related.
 
    0.813
ACX66046.1
KEGG: pjd:Pjdr2_5969 hypothetical protein.
 
     0.739
ACX67996.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_3930 transcriptional regulator, GntR family.
  
     0.731
ACX68477.1
TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: pjd:Pjdr2_4658 cytidyltransferase-related domain protein.
   
    0.674
ACX63043.1
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pjd:Pjdr2_5297 transcriptional regulator, GntR family.
  
     0.622
ACX63679.1
PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: pjd:Pjdr2_5381 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin.
       0.447
Your Current Organism:
Paenibacillus sp. Y412MC10
NCBI taxonomy Id: 481743
Other names: P. sp. Y412MC10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.