STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX63920.1KEGG: pjd:Pjdr2_0561 UreA ABC transporter, ATP-binding protein UrtE; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase. (231 aa)    
Predicted Functional Partners:
ACX63918.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_0559 UreA ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
ACX63916.1
TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: pjd:Pjdr2_0557 UreA ABC transporter, UreA binding protein.
 
 
 0.994
ACX63917.1
TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: pjd:Pjdr2_0558 UreA ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
ACX63919.1
TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: pjd:Pjdr2_0560 UreA ABC transporter, ATP-binding protein UrtD.
 
 
0.983
ureA
KEGG: xau:Xaut_4155 urease, gamma subunit; TIGRFAM: urease, gamma subunit; urease, beta subunit; PFAM: Urease gamma subunit region; Urease beta subunit; Belongs to the urease gamma subunit family.
 
   
 0.743
ureC
KEGG: pjd:Pjdr2_4326 urease, alpha subunit; TIGRFAM: urease, alpha subunit; PFAM: Urease alpha-subunit domain protein; amidohydrolase; Amidohydrolase 3.
 
   
 0.693
ACX66406.1
TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: pjd:Pjdr2_3444 flagellar motor switch protein FliM.
   
   0.478
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
       0.417
Your Current Organism:
Paenibacillus sp. Y412MC10
NCBI taxonomy Id: 481743
Other names: P. sp. Y412MC10
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