STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX63962.1PFAM: ABC-2 type transporter; KEGG: bth:BT_0926 ABC-type transport, permease protein. (317 aa)    
Predicted Functional Partners:
ACX63963.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE1863 ABC-type multidrug transport system, ATPase component.
 
   0.954
ACX63964.1
KEGG: tte:TTE1864 S-layer domain-containing protein.
 
    0.938
ACX63965.1
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bha:BH3216 RNA polymerase ECF-type sigma factor.
  
    0.632
ACX63966.1
KEGG: bha:BH3217 hypothetical protein.
       0.417
Your Current Organism:
Paenibacillus sp. Y412MC10
NCBI taxonomy Id: 481743
Other names: P. sp. Y412MC10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.