STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX63985.1TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: pjd:Pjdr2_4030 stage V sporulation protein AC. (162 aa)    
Predicted Functional Partners:
ACX63986.1
TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; KEGG: pjd:Pjdr2_4029 stage V sporulation protein AD.
 
  
 0.990
ACX63987.1
TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: pjd:Pjdr2_4028 stage V sporulation protein AE.
 
  
0.931
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.845
ACX64427.1
PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_2346 GerA spore germination protein.
 
  
 0.844
spoIIAB
Anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
 
   
 0.812
ACX64473.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.805
ACX64109.1
TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: pjd:Pjdr2_3880 sporulation protein, YlmC/YmxH family.
  
    0.797
ACX68105.1
TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: pjd:Pjdr2_5794 sporulation transcriptional regulator SpoIIID.
  
   
 0.789
ACX68196.1
PFAM: GerA spore germination protein; KEGG: tte:TTE2555 hypothetical protein.
  
  
 0.785
ACX66263.1
PFAM: GerA spore germination protein; KEGG: pjd:Pjdr2_6076 GerA spore germination protein.
  
  
 0.784
Your Current Organism:
Paenibacillus sp. Y412MC10
NCBI taxonomy Id: 481743
Other names: P. sp. Y412MC10
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