Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACX66309.1 | ACX66310.1 | GYMC10_4081 | GYMC10_4082 | PFAM: NUDIX hydrolase; KEGG: lsp:Bsph_2972 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family. | PFAM: HesB/YadR/YfhF-family protein; KEGG: bha:BH2252 hypothetical protein. | 0.697 |
ACX66309.1 | ACX66665.1 | GYMC10_4081 | GYMC10_4440 | PFAM: NUDIX hydrolase; KEGG: lsp:Bsph_2972 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family. | PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_3938 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.567 |
ACX66309.1 | ACX66733.1 | GYMC10_4081 | GYMC10_4510 | PFAM: NUDIX hydrolase; KEGG: lsp:Bsph_2972 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family. | PFAM: NUDIX hydrolase; KEGG: bcu:BCAH820_4020 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.584 |
ACX66310.1 | ACX66309.1 | GYMC10_4082 | GYMC10_4081 | PFAM: HesB/YadR/YfhF-family protein; KEGG: bha:BH2252 hypothetical protein. | PFAM: NUDIX hydrolase; KEGG: lsp:Bsph_2972 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family. | 0.697 |
ACX66665.1 | ACX66309.1 | GYMC10_4440 | GYMC10_4081 | PFAM: NUDIX hydrolase; KEGG: pjd:Pjdr2_3938 NUDIX hydrolase; Belongs to the Nudix hydrolase family. | PFAM: NUDIX hydrolase; KEGG: lsp:Bsph_2972 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family. | 0.567 |
ACX66733.1 | ACX66309.1 | GYMC10_4510 | GYMC10_4081 | PFAM: NUDIX hydrolase; KEGG: bcu:BCAH820_4020 ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | PFAM: NUDIX hydrolase; KEGG: lsp:Bsph_2972 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family. | 0.584 |