STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACX68534.1KEGG: pjd:Pjdr2_6282 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family. (279 aa)    
Predicted Functional Partners:
ACX68535.1
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pjd:Pjdr2_6283 cobyrinic acid ac-diamide synthase.
 
 
 0.996
ACX68536.1
KEGG: pjd:Pjdr2_6284 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; Belongs to the ParB family.
 
   
0.904
ACX66353.1
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; KEGG: pjd:Pjdr2_3390 cell divisionFtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.790
rsmG
Methyltransferase GidB; Specifically methylates the N7 position of guanine in position 535 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.754
ACX67447.1
KEGG: pjd:Pjdr2_1239 hypothetical protein.
  
 
 0.750
ACX68532.1
KEGG: pjd:Pjdr2_6280 hypothetical protein.
  
 
 0.708
ACX68533.1
TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: pjd:Pjdr2_6281 cysteine desulfurase family protein.
  
    0.695
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.669
ACX65178.1
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pjd:Pjdr2_3061 integrase family protein; Belongs to the 'phage' integrase family.
 
  
 0.630
ACX64661.1
KEGG: lsp:Bsph_p183 hypothetical protein.
  
 
 0.616
Your Current Organism:
Paenibacillus sp. Y412MC10
NCBI taxonomy Id: 481743
Other names: P. sp. Y412MC10
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