Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EIQ81205.1 | EIQ82267.1 | SCAZ3_02215 | SCAZ3_07890 | COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | COG2116 Formate/nitrite family of transporters. | 0.429 |
EIQ81384.1 | EIQ82267.1 | SCAZ3_03130 | SCAZ3_07890 | COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | COG2116 Formate/nitrite family of transporters. | 0.429 |
EIQ82108.1 | EIQ82267.1 | SCAZ3_07035 | SCAZ3_07890 | COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. | COG2116 Formate/nitrite family of transporters. | 0.423 |
EIQ82266.1 | EIQ82267.1 | SCAZ3_07885 | SCAZ3_07890 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | COG2116 Formate/nitrite family of transporters. | 0.575 |
EIQ82266.1 | EIQ82268.1 | SCAZ3_07885 | SCAZ3_07895 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | Hypothetical protein. | 0.459 |
EIQ82266.1 | recR | SCAZ3_07885 | SCAZ3_07880 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.824 |
EIQ82267.1 | EIQ81205.1 | SCAZ3_07890 | SCAZ3_02215 | COG2116 Formate/nitrite family of transporters. | COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.429 |
EIQ82267.1 | EIQ81384.1 | SCAZ3_07890 | SCAZ3_03130 | COG2116 Formate/nitrite family of transporters. | COG0553 Superfamily II DNA/RNA helicases, SNF2 family. | 0.429 |
EIQ82267.1 | EIQ82108.1 | SCAZ3_07890 | SCAZ3_07035 | COG2116 Formate/nitrite family of transporters. | COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. | 0.423 |
EIQ82267.1 | EIQ82266.1 | SCAZ3_07890 | SCAZ3_07885 | COG2116 Formate/nitrite family of transporters. | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | 0.575 |
EIQ82267.1 | EIQ82268.1 | SCAZ3_07890 | SCAZ3_07895 | COG2116 Formate/nitrite family of transporters. | Hypothetical protein. | 0.547 |
EIQ82267.1 | EIQ82269.1 | SCAZ3_07890 | SCAZ3_07900 | COG2116 Formate/nitrite family of transporters. | Transcriptional regulator, biotin repressor family protein; COG1827 Predicted small molecule binding protein (contains 3H domain). | 0.406 |
EIQ82267.1 | EIQ82792.1 | SCAZ3_07890 | SCAZ3_10535 | COG2116 Formate/nitrite family of transporters. | COG0288 Carbonic anhydrase. | 0.774 |
EIQ82267.1 | recR | SCAZ3_07890 | SCAZ3_07880 | COG2116 Formate/nitrite family of transporters. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.572 |
EIQ82268.1 | EIQ82266.1 | SCAZ3_07895 | SCAZ3_07885 | Hypothetical protein. | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | 0.459 |
EIQ82268.1 | EIQ82267.1 | SCAZ3_07895 | SCAZ3_07890 | Hypothetical protein. | COG2116 Formate/nitrite family of transporters. | 0.547 |
EIQ82268.1 | EIQ82269.1 | SCAZ3_07895 | SCAZ3_07900 | Hypothetical protein. | Transcriptional regulator, biotin repressor family protein; COG1827 Predicted small molecule binding protein (contains 3H domain). | 0.723 |
EIQ82268.1 | recR | SCAZ3_07895 | SCAZ3_07880 | Hypothetical protein. | Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. | 0.413 |
EIQ82269.1 | EIQ82267.1 | SCAZ3_07900 | SCAZ3_07890 | Transcriptional regulator, biotin repressor family protein; COG1827 Predicted small molecule binding protein (contains 3H domain). | COG2116 Formate/nitrite family of transporters. | 0.406 |
EIQ82269.1 | EIQ82268.1 | SCAZ3_07900 | SCAZ3_07895 | Transcriptional regulator, biotin repressor family protein; COG1827 Predicted small molecule binding protein (contains 3H domain). | Hypothetical protein. | 0.723 |
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